Peer-reviewed scientific journal publications by Roman Vetter, PhD

For contact details, visit https://bsse.ethz.ch/cobi.

Thumbnail [34] Disorder-to-order transition of long fibers contained in evaporating sessile drops
Shatadru Sannyamath, Roman Vetter, Henning Bonart, Maximilian Hartmann, Ranjan Ganguly, Steffen Hardt
Soft Matter 20, 3107-3117 (2024)
Preprint PDF, also available on arXiv:2403.03836
Video 1 Video 2 Video 3
Thumbnail [33] Reply to: Assessing the precision of morphogen gradients in neural tube development
Roman Vetter, Dagmar Iber
Nature Communications 15, 930 (2024)
Preprint PDF (supersedes the published version), also available on arXiv:2402.00781
Thumbnail [32] Morphogen gradients can convey position and time in growing tissues
Roman Vetter, Dagmar Iber
Preprint PDF, also available on bioRxiv 2023.08.28.555133
Thumbnail [31] Morphometry and mechanical instability at the onset of epithelial bladder cancer
Franziska L. Lampart, Roman Vetter, Yifan Wang, Kevin A. Yamauchi, Nico Strohmeyer, Florian Meer, Marie-Didiée Hussherr, Gieri Camenisch, Hans-Helge Seifert, Cyrill A. Rentsch, Clémentine Le Magnen, Daniel J. Müller, Lukas Bubendorf, Dagmar Iber
Preprint PDF, also available on bioRxiv 2023.08.17.553533
Thumbnail [30] Geometric mapping from rectilinear material orthotropy to isotropy: Insights into plates and shells
Wenqian Sun, Cody Rasmussen, Roman Vetter, Jayson Paulose
Physical Review E 108, 065003 (2023)
Preprint PDF, also available on arXiv:2307.15746
Thumbnail [29] PolyHoop: Soft particle and tissue dynamics with topological transitions
Roman Vetter, Steve V. M. Runser, Dagmar Iber
Computer Physics Communications 299, 109128 (2024) (open access)
Preprint PDF, also available on arXiv:2307.15006
Video 1 Video 2 Video 3 Video 4 Video 5
Free source code available at data.mendeley.com
Thumbnail [28] SimuCell3D: three-dimensional simulation of tissue mechanics with cell polarization
Steve Runser, Roman Vetter, Dagmar Iber
Nature Computational Science 4, 299-309 (2024) (open access)
Preprint PDF, also available on bioRxiv 2023.03.28.534574
Video 1 Video 2
Free source code available at git.bsse.ethz.ch
Thumbnail [27] 2D effects enhance precision of gradient-based tissue patterning
Yuchong Long, Roman Vetter, Dagmar Iber
iScience 26, 107880 (2023) (open access)
Preprint PDF, also available on bioRxiv 2023.03.13.532369
Thumbnail [26] Patterning precision under non-linear morphogen decay and molecular noise
Jan A. Adelmann, Roman Vetter, Dagmar Iber
eLife 12, e84757 (2023) (open access)
Preprint PDF, also available on bioRxiv 2022.11.04.514993
Thumbnail [25] Geometric effects position renal vesicles during kidney development
Malte Mederacke, Lisa Conrad, Nikolaos Doumpas, Roman Vetter, Dagmar Iber
Cell Reports 42, 113526 (2023) (open access, cover image)
Preprint PDF, also available on bioRxiv 2022.08.30.505859
Video 1 Video 2 Video 3
Thumbnail [24] Bacterial biofilms use chiral branches to escape crowded environments by tracking oxygen gradient
Mustafa Basaran, Tevfik C. Yüce, Yusuf I. Yaman, Roman Vetter, Askin Kocabas
Preprint available on arXiv:2208.09730
Thumbnail [23] Relationship between epithelial organization and morphogen interpretation
Dagmar Iber, Roman Vetter
Current Opinion in Genetics & Development 75, 101916 (2022) (open access, review)
Preprint PDF
Thumbnail [22] 3D organisation of cells in pseudostratified epithelia
Dagmar Iber, Roman Vetter
Frontiers in Physics 10, 898160 (2022) (open access, perspective)
Preprint PDF
Thumbnail [21] The impact of cell size on morphogen gradient precision
Jan A. Adelmann, Roman Vetter, Dagmar Iber
Development 150, dev201702 (2023) (open access, highlighted)
Preprint PDF, also available on bioRxiv 2022.02.02.478800
Thumbnail [20] Hinge point emergence in mammalian spinal neurulation
Veerle de Goederen, Roman Vetter, Katie McDole, Dagmar Iber
Proceedings of the National Academy of Sciences USA 119, e2117075119 (2022) (open access)
Preprint PDF, also available on bioRxiv 2021.10.22.465433
Video 1 Video 2 Video 3
Thumbnail [19] Precision of morphogen gradients in neural tube development
Roman Vetter, Dagmar Iber
Nature Communications 13, 1145 (2022) (open access)
Preprint PDF, also available on bioRxiv 2021.04.20.440728
Thumbnail [18] 3D cell neighbour dynamics in growing pseudostratified epithelia
Harold F. Gómez, Mathilde S. Dumond, Leonie Hodel, Roman Vetter, Dagmar Iber
eLife 10, e68135 (2021) (open access)
Preprint PDF, also available on bioRxiv 2021.03.05.434123
Video 1 Video 2 Video 3 Video 4
Thumbnail [17] Large-scale orientational order in bacterial colonies during inward growth
Mustafa Basaran, Yusuf I. Yaman, Tevfik C. Yüce, Roman Vetter, Askin Kocabas
eLife 11, e72187 (2022) (open access)
Preprint PDF, also available on arXiv:2008.05545
Video 1 Video 2 Video 3 Video 4
Thumbnail [16] The biomechanical basis of biased epithelial tube elongation in lung and kidney development
Lisa Conrad, Steve V. M. Runser, Harold F. Gómez, Christine M. Lang, Mathilde S. Dumond, Aleksandra Sapala, Laura Schaumann, Odyssé Michos, Roman Vetter, Dagmar Iber
Development 148, dev194209 (2021) (open access, highlighted)
Preprint PDF, also available on bioRxiv 2020.06.22.166231
Video 1 Video 2 Video 3
Thumbnail [15] Aboav-Weaire's law in epithelia results from an angle constraint in contiguous polygonal lattices
Roman Vetter, Marco Kokic, Harold Gómez, Leonie Hodel, Bruno Gjeta, Antonella Iannini, Gema Villa-Fombuena, Fernando Casares, Dagmar Iber
Preprint PDF, also available on bioRxiv 591461
Thumbnail [14] Collapse of orthotropic spherical shells
Gautam Munglani, Falk K. Wittel, Roman Vetter, Filippo Bianchi, Hans J. Herrmann
Physical Review Letters 123, 058002 (2019)
Preprint PDF, also available on arXiv:1903.09476
Video 1 Video 2 Video 3 Video 4
Thumbnail [13] Emergence of active nematics in chaining bacterial biofilms
Yusuf I. Yaman, Esin Demir, Roman Vetter, Askin Kocabas
Nature Communications 10, 2285 (2019) (open access)
Preprint PDF, also available on arXiv:1811.12076
Video 1 Video 2 Video 3 Video 4 Video 5
Thumbnail [12] Experimental parameter uncertainty in proton exchange membrane fuel cell modeling. Part II: Sensitivity analysis and importance ranking
Roman Vetter, Jürgen O. Schumacher
Journal of Power Sources 439, 126529 (2019)
Preprint PDF, also available on arXiv:1811.10093
Thumbnail [11] Experimental parameter uncertainty in proton exchange membrane fuel cell modeling. Part I: Scatter in material parameterization
Roman Vetter, Jürgen O. Schumacher
Journal of Power Sources 438, 227018 (2019)
Preprint PDF, also available on arXiv:1811.10091
Thumbnail [10] Free open reference implementation of a two-phase PEM fuel cell model
Roman Vetter, Jürgen O. Schumacher
Computer Physics Communications 234, 222-234 (2019) (open access)
Preprint PDF, also available on arXiv:1811.09811
Free source code available at data.mendeley.com
Thumbnail [9] Modeling the effects of using gas diffusion layers with patterned wettability for advanced water management in proton exchange membrane fuel cells
Jaka Dujc, Antoni Forner-Cuenca, Philip Marmet, Magali Cochet, Roman Vetter, Jürgen O. Schumacher
Journal of Electrochemical Energy Conversion and Storage 15, 021001 (2018)
Preprint PDF, also available on arXiv:2007.15571
Thumbnail [8] Particle-fluid-structure interaction for debris flow impact on flexible barriers
Alessandro Leonardi, Falk K. Wittel, Miller Mendoza, Roman Vetter, Hans J. Herrmann
Computer-Aided Civil and Infrastructure Engineering 31, 323-333 (2016)
Preprint PDF, also available on arXiv:1409.8034
Video
Thumbnail [7] Packing of elastic wires in flexible shells
Roman Vetter, Falk K. Wittel, Hans J. Herrmann
EPL 112, 44003 (2015)
Preprint PDF, also available on arXiv:1504.00776
Video 1 Video 2 Video 3
Thumbnail [6] Orthotropic rotation-free thin shell elements
Gautam Munglani, Roman Vetter, Falk K. Wittel, Hans J. Herrmann
Computational Mechanics 56, 785-793 (2015)
Preprint PDF, also available on arXiv:1508.00347
Video
Thumbnail [5] Morphogenesis of filaments growing in flexible confinements
Roman Vetter, Falk K. Wittel, Hans J. Herrmann
Nature Communications 5, 4437 (2014) (open access)
Preprint PDF, also available on arXiv:1407.4571
Video 1 Video 2 Video 3 Video 4 Video 5
Thumbnail [4] Simulating thin sheets: buckling, wrinkling, folding and growth
Roman Vetter, Norbert Stoop, Falk K. Wittel, Hans J. Herrmann
Journal of Physics: Conference Series 487, 012012 (2014) (open access)
Preprint PDF, also available on arXiv:1507.08758
Video 1 Video 2 Video 3 Video 4 Video 5
Thumbnail [3] Subdivision shell elements with anisotropic growth
Roman Vetter, Norbert Stoop, Thomas Jenni, Falk K. Wittel, Hans J. Herrmann
International Journal for Numerical Methods in Engineering 95, 791-810 (2013)
Preprint PDF, also available on arXiv:1208.4434
Video 1 Video 2 Video 3 Video 4 Video 5
Thumbnail [2] Finite element simulation of dense wire packings
Roman Vetter, Falk K. Wittel, Norbert Stoop, Hans J. Herrmann
European Journal of Mechanics A/Solids 37, 160-171 (2013)
Preprint PDF, also available on arXiv:1111.5128
Video 1 Video 2
Thumbnail [1] Simulating isothermal aging of snow
Roman Vetter, Stephan Sigg, Herman M. Singer, Dirk Kadau, Hans J. Herrmann, Martin Schneebeli
EPL 89, 26001 (2010)
Preprint PDF, also available on arXiv:2007.15379
Video 1 Video 2